Next Gen Seq Data Analysis

2 Credits · Level: Graduate, Undergraduate

This course will cover analysis and interpretation of Next Generation Sequencing (NGS) data. Topics will include genome sequencing and annotation, gene expression analysis (RNAseq), and genomic variant analysis. A substantial part of the course will be devoted to hands-on tutorials using the Galaxy and R platforms to work with NGS data, from the raw sequencing reads through biological interpretation of the results. Students will apply what they have learned by conducting an independent RNAseq analysis project and presenting their results in the format of a scientific paper. Upon completing the course, students should be familiar with the practical aspects of carrying out an NGS analysis workflow and appreciate how NGS technology can be used to further our understanding of biological systems.