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ABT 785

APPLICATION OF BIOINFORMATICS

3 credits.

Exploration and application of existing bioinformatic tools. Implementation of pre-coded solutions to data acquisition, wrangling, analysis, visualization, and structural modeling problems. Complete a project that generates a multi-system workflow to solve bioinformatic problems.

Prerequisites & course information

Requisites: ABT 720 and 730 Course Designation: Grad 50% - Counts toward 50% graduate coursework requirement Repeatable for Credit: No Last Taught: Fall 2026 Learning Outcomes: 1. Identify and demonstrate use of existing databases for genomic, transcriptomic, proteomic, and metabolomics analysis Audience: Graduate 2. Describe construction and limitations for existing databases Audience: Graduate 3. Identify and demonstrate existing tools for sequence analysis Audience: Graduate 4. Identify and critique methods and tools for annotation of genomes and phylogentic analysis Audience: Graduate 5. Identify and critique methods for assigning protein structure and function and metabolite profiles Audience: Graduate 6. Describe and select best practices in adapting and editing existing tools Audience: Graduate 7. Identify methods for developing multi-tool workflows; build, analyze, and critque functional workflows Audience: Graduate Learning Outcomes: 1. Identify and demonstrate use of existing databases for genomic, transcriptomic, proteomic, and metabolomics analysis Audience: Graduate 2. Describe construction and limitations for existing databases Audience: Graduate 3. Identify and demonstrate existing tools for sequence analysis Audience: Graduate 4. Identify and critique methods and tools for annotation of genomes and phylogentic analysis Audience: Graduate 5. Identify and critique methods for assigning protein structure and function and metabolite profiles Audience: Graduate 6. Describe and select best practices in adapting and editing existing tools Audience: Graduate 7. Identify methods for developing multi-tool workflows; build, analyze, and critque functional workflows Audience: Graduate

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