Neural Data Analysis

Undergraduate

We discuss data analysis methods that are used in the neuroscience community. Methods include classical descriptive and inferential statistics, point process models, mutual information measures, machine learning (neural decoding) analyses, dimensionality reduction methods, and representational similarity analyses. Each week we read a research paper that uses one of these methods, and we replicate these analyses using the R or Python programming language. Emphasis is on analyzing neural spiking data, although we also discuss other imaging modalities such as magneto/electro-encephalography (EEG/MEG), two-photon imaging, and possibility functional magnetic resonance imaging data (fMRI). Data we analyze includes smaller datasets, such as single neuron recordings from songbird vocal motor system, as well as larger data sets, such as the Allen Brain observatory’s simultaneous recordings from the mouse visual system. Prerequisite: S&DS 230. Background in neuroscience is recommended but not required (e.g., it would be useful to have taken at the level of NSCI 160 ). TTh 2:35pm-3:50pm